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Almond Flour Thumbprint Cookies (Vegan)

Almond Flour Vegan Thumbprint Cookies – Perfectly soft, chewy, and delicious, flourless shortbread cookies with jam are made with just 5 ingredients and ready in 20 minutes. Gluten-free, paleo, low carb, and wfpb recipe.

head on view of 3 stacked almond thumbprint cookies surrounded by more cookies.

Craving something sweet but want to keep it simple and healthy?

These flourless, vegan thumbprint cookies filled with jam are just what you need to satisfy that craving!

Why We Love This Recipe!

  • Made with almond flour, they’re rich in protein, super easy to make, using one bowl and pantry staples, and perfect for just about any occasion!
  • Whether it’s the holidays, picnics, potlucks, or parties, these grain and dairy-free cookies are fantastic and will be loved by all!
top down view of the ingredients used to make healthy thumbprint cookies.

Ingredients You’ll Need

Here’s a list of everything you’ll need, plus a few ideas and tips on substitutions.

  • Almond flour – I used a super fine almond flour from Bob’s Red Mill (affiliate link). I haven’t tried this with almond meal, but I’m pretty sure it will be just fine.
  • Pure maple syrup – This natural sweetener is perfect, adding just the right amount of sweetness.
  • Olive oil – I used light-flavored olive oil here, but any neutral oil will work. Coconut oil is great and will add a hint of coconut flavor.
  • Vanilla – Adds a lovely flavor to this new classic cookie.
  • Salt – My favorite is pink mineral salt, but any salt will do.
  • Nuts – I rolled my cookies in crushed slivered almonds for texture. For variation, try using crushed pistachios, walnuts, pecans, or macadamia nuts. Rolling your cookies in nuts is optional.
  • Jam – Use your favorite jam, strawberry, cherry, raspberry, apricot etc., or make your own like this Triple Berry Chia Jam (it’s easy, sugar-free, and absolutely delicious).
side by side photos showing the process of rolling flourless thumbprint cookie dough.

How To Make Almond Flour Thumbprint Cookies

Making vegan almond flour thumbprint cookies is as easy as can be!

Here is a quick look at the steps with pictures for reference (Note: the full printable recipe card is below)…

  • In a medium bowl, combine almond flour, salt, olive oil, maple syrup, and vanilla, and mix well to combine. The dough should be stiff yet soft and easily moldable.
  • Scoop out rounded tablespoons of dough and roll them into a ball, as shown above. To keep the cookies uniform, I used this 1 tablespoon cookie scoop (affiliate link), but a tablespoon measuring spoon works great too.
side by side photos showing the process of making low carb almond flour thumbprint cookies.
  • Place the crushed nuts in a small bowl.
  • Roll each dough ball in the nuts and place them on a cookie sheet lined with parchment paper or silicone mat about 2 inches apart (as shown above left).
  • Using the back of a 1/2 teaspoon measuring spoon or your thumb, gently press in the center of each dough ball (above right). Any large cracks in the sides of the cookies can be pinched together. A few cracks are fine and won’t make your cookies fall apart once cooked.
top down view of healthy almond thumbprint cookies on a baking sheet and ready for the oven.
  • Fill each indent with the jam of choice as shown above.
  • Bake in a preheated oven at 350 degrees F. for 10 – 15 minutes, ovens may vary (these cookies baked for 15 min). Cookies will harden as they cool.

And that’s it! Easy, healthy, and delicious!

top down view of freshly made almond flour thumbprint cookies on a marble slab.

Commonly Asked Questions

Can I Add Flavor to the Cookie Dough?

Yes! For variation, try adding 1/2 teaspoon of cinnamon or cardamom for a nice layer of flavor. Rosemary or culinary lavender would also be an interesting twist, adding about 1/2 teaspoon dried or 1 teaspoon fresh, chopped. For an infusion of lemon, use lemon-flavored olive oil and add a little lemon zest to the cookie dough. Do let me know in the comments any different flavor combinations you try!

What If I’m Allergic To Nuts?

For those with nut allergies, try these gluten-free Oat Jam Thumbprint Cookies made with oats and oat flour.

How Do You Store Vegan Thumbprint Cookies?

My favorite way to store these almond flour thumbprint cookies is to keep them loosely covered and not in an airtight container. I find that if kept in an airtight container, they soften up too much for my liking. It’s not a bad thing if you prefer them to be super soft. You’ll have to try both ways to see what’s best for you.

Can You Freeze Almond Flour Thumbprint Cookies?

Yes! These cookies, with the jelly and all, are freezer-friendly for up to 2 months. To freeze, let the cookies cool completely and layer them in airtight freezer-safe containers with wax paper between the layers so the cookies don’t freeze together.

head on view of stacked almond thumbprint cookies surrounded by more cookies.

More Vegan Cookie Recipes!

If you try this flourless thumbprint cookie recipe, please let me know! Leave a comment and rate it below. I love to hear what you think, or any changes you make.



5 Stars 4 Stars 3 Stars 2 Stars 1 Star

5 from 38 reviews

Delicious, soft, chewy and perfectly sweet almond flour vegan thumbprint cookies filled jam are perfect for the holidays or any occasion! Wfpb, grain-free, and gluten free recipe.

  • Author: Julie | The Simple Veganista
  • Prep Time: 5
  • Cook Time: 15 min
  • Total Time: 20 minutes
  • Yield: Makes 1618 cookies 1x
  • Category: Cookies, Dessert, Snack
  • Method: Bake
  • Cuisine: Vegan, American


Units Scale
  • 2 cups almond flour (I used Bob’s Red Mill Fine AF)
  • pinch of salt
  • 1/4 cup pure maple syrup
  • 1/4 cup light flavored olive oil
  • 2 teaspoons vanilla extract
  • 1/3 cup slivered almonds, crushed or chopped (optional)
  • 3 tablespoons triple berry chia seed jam (or your favorite jam), divided


Preheat oven to 350 degrees F. Line a baking sheet with parchment paper or silicon mat.

Make the dough: In a medium bowl, whisk together the maple syrup, olive oil and vanilla. Add the almond flour and salt, mix well until the mixture forms a soft dough consistency.

Almonds: Place the crushed almonds in a small bowl, set aside.

Shape the cookies: Roll dough into 1 inch balls (I used a 1 tablespoon measuring scoop, scooping up rounded tablespoons full of dough). Roll the dough balls in the crushed almonds, and place on a rimmed baking sheet, about 2 inches apart.

Add the jam: Using your thumb or the back of 1/2 teaspoon measuring spoon, make an indent in the center of each cookie. Pinch together any large cracks around the sides of each cookie. Fill the indent with 1/2 teaspoon of jam.

Bake: Place in the oven and bake for 10 – 15 minutes, oven may vary (see notes). Once done, the cookies will be soft and harden as they cool.

Makes 16 – 18 cookies

Store: Store loosely covered on the counter for up to 3 – 4 days. You can also keep them in an airtight container, just note they will soften a bit but will still be chewy. Or keep in a covered container in the refrigerator for 7 – 10 days. To freeze, let cool and store in freezer safe containers with parchment paper between each layer, will keep for to 2 months.


Oil: This would be great with a lemon flavored olive oil. Coconut oil would also be great, just be sure it’s softened, or in liquid state, before using.

Nuts: Change up the nuts using your favorite or what you have on hand. Crushed pistachios, pecans, or walnuts would all work well.

Flavors: Add 1/2 teaspoon of cinnamon for a nice layer of flavor. Or try adding 1/2 teaspoon dried rosemary that’s been finely chopped. As mentioned above, use lemon olive oil, plus a little lemon zest.

Oven Time: Baking times may be vary since ovens are different. I baked all my batches for the full 15 minutes and they were perfect. Some may find 10 minutes is best, as noted in the comments. Use your best judgement.

RECOMMENDED EQUIPMENT: I love my Silpat or these parchment liners for lining this rimmed baking sheet (affiliate links).

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  1. Terrific recipe! I got the idea from another comment to make it with sugar free syrup, since my mom is avoiding sugar right now. They turned out great, the cookie part is mildly sweet which is a great contrast to the bright flavor of the jam. Love it!

  2. Gabriella says:

    This recipe is awesome. I found that is makes 10-12 cookies. However, this is a recipe that you will continue to use again and again. Thank you for this wonderful recipe.

  3. Super easy to make and delicious! Thank you!

  4. Thank you for this recipe! I was recently diagnosed as a pre diabetic so I love finding things I can make for dessert. I used sugar free maple syrup and reduced sugar jam. Tastes delicious!

  5. These are delicious! I just moved across the country and was in the mood for something sweet but not too labor intensive or junk-food-y: so glad to have found these So quick and easy!
    I love every single recipe of yours I’ve tried, and it’s made the transition to vegan easy and delicious!

  6. These are amazing! Great recipe. I found a new favorite cookie! Thank you Simple Veganista!

  7. These are really delicious! I just made them for the first time for my adult sons who are both vegan. I am really pleased with the outcome (thanks to you!).

  8. This recipe is so easy and straightforward, my 3 and 5 year olds enjoy the entire process of making this. Thank you for the recipe!

    1. Tara Thronson says:

      Hi there! I was wondering, do you think we could try butter or butter alternative in place of the oil? Thanks in advance :)

      1. Julie | The Simple Veganista says:

        Yes, you can give it a try and see how it goes. I haven’t tested with butter, but it should be ok for these cookies. I would love to know how it goes, as it will be super helpful for others. Enjoy, and good luck!

  9. Barby Siegel says:

    Fantastic. I used lemon infused olive oil and lemon zest in the flour. Taste great and look very professional. And I love that no sugar is required, other than a small amount of maple syrup. Thank you.

    1. Denise Thomas says:

      Easy and addictive for vegans and non vegans!!

  10. Super easy to make and delicious! Thank you for the recipe!

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